Basic Statistics
Measure | Value |
---|---|
Filename | H9_treated_PRO-seq_1_R1_processed.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 29119715 |
Sequences flagged as poor quality | 0 |
Sequence length | 10-38 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
NNNNNNNNNNNNNNNNNNNNNNNNNNN | 256800 | 0.8818767628735378 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 209115 | 0.7181217261226629 | No Hit |
GGCACCCGAGAATTCCA | 105317 | 0.3616690616649236 | Illumina Small RNA Adapter 2 (100% over 17bp) |
TTGAAAGTCAGCCCTCGACACAAGGGTTTGT | 100988 | 0.34680284473938017 | No Hit |
CAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTA | 71388 | 0.24515349823993815 | No Hit |
GCACCCGAGAATTCCA | 66285 | 0.22762928826741607 | Illumina Small RNA Adapter 2 (100% over 16bp) |
CGAGAATTCCA | 52730 | 0.18108006894985065 | Illumina Small RNA Adapter 2 (100% over 11bp) |
CCGAGAATTCCA | 46500 | 0.15968562879135323 | Illumina Small RNA Adapter 2 (100% over 12bp) |
ACCCGAGAATTCCA | 42694 | 0.14661544592726955 | Illumina Small RNA Adapter 2 (100% over 14bp) |