FastQCFastQC Report
Tue 18 Feb 2020
K562_GRO-seq_R1_processed.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameK562_GRO-seq_R1_processed.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29322367
Sequences flagged as poor quality0
Sequence length2-50
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph