Streaming uncompressed output to STDOUT...

Read1 before filtering:
total reads: 1000000
total bases: 37678766
Q20 bases: 34709953(92.1207%)
Q30 bases: 34018346(90.2852%)

Read1 after filtering:
total reads: 439519
total bases: 16134044
Q20 bases: 15454671(95.7892%)
Q30 bases: 15178418(94.077%)

Filtering result:
reads passed filter: 439519
reads failed due to low quality: 66799
reads failed due to too many N: 105
reads failed due to too short: 493577
reads with adapter trimmed: 540203
bases trimmed due to adapters: 14696777

Duplication rate (may be overestimated since this is SE data): 28.6979%

JSON report: /sfs/lustre/allocations/shefflab/processed/peppro_tutorial/pe/07-31-19/results_pipeline/tutorial/fastqc/tutorial_R2_rmAdapter.json
HTML report: /sfs/lustre/allocations/shefflab/processed/peppro_tutorial/pe/07-31-19/results_pipeline/tutorial/fastqc/tutorial_R2_rmAdapter.html

fastp --overrepresentation_analysis --thread 1 --in1 /sfs/lustre/allocations/shefflab/processed/peppro_tutorial/pe/07-31-19/results_pipeline/tutorial/fastq/tutorial_R2.fastq --adapter_sequence GATCGTCGGACTGTAGAACTCTGAAC --length_required 26 --html /sfs/lustre/allocations/shefflab/processed/peppro_tutorial/pe/07-31-19/results_pipeline/tutorial/fastqc/tutorial_R2_rmAdapter.html --json /sfs/lustre/allocations/shefflab/processed/peppro_tutorial/pe/07-31-19/results_pipeline/tutorial/fastqc/tutorial_R2_rmAdapter.json --report_title tutorial --stdout 
fastp v0.19.4, time used: 7 seconds