tutorial summary| sample_name | organism | protocol | read_type | read1 | read2 | File_mb | Read_type | Genome | Raw_reads | Fastq_reads | Trimmed_reads | Trim_loss_rate | Aligned_reads_human_rDNA | Alignment_rate_human_rDNA | Mapped_reads | QC_filtered_reads | Aligned_reads | Alignment_rate | Total_efficiency | Read_depth | Mitochondrial_reads | Maximum_read_length | NRF | PBC1 | PBC2 | Unmapped_reads | TSS_Plus_Score | TSS_Minus_Score | Pause_index | Plus FRiP | Minus FRiP | mRNA_contamination | Time | Success |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| tutorial | human | PROSEQ | paired | /scratch/jps3dp/DATA/proseq/data/fastq/tutorial_r1.fq.gz | /scratch/jps3dp/DATA/proseq/data/fastq/tutorial_r2.fq.gz | 50.42 | paired | hg38 | 2000000 | 2000000 | 497796 | 75.11 | 5860.0 | 1.18 | 431804 | 274898 | 156906.0 | 31.52 | 7.85 | 1.17 | 5357 | 30 | 1.0 | 15975.0 | 15975.0 | 468224 | 33.3 | 4.3 | 228.97 | 0.07 | 0.07 | 4.26 | 0:09:52 | 11-27-14:04:51 |