Sample name: tutorial
Looper stats summary
sample_name |
tutorial |
organism |
human |
protocol |
PROSEQ |
read_type |
paired |
read1 |
tutorial_r1.fq.gz |
read2 |
tutorial_r2.fq.gz |
File_mb |
50.42 |
Read_type |
paired |
Genome |
hg38 |
Raw_reads |
2000000 |
Fastq_reads |
2000000 |
Trimmed_reads |
497796 |
Trim_loss_rate |
75.11 |
Aligned_reads_human_rDNA |
5860.0 |
Alignment_rate_human_rDNA |
1.18 |
Mapped_reads |
431804 |
QC_filtered_reads |
274898 |
Aligned_reads |
156906.0 |
Alignment_rate |
31.52 |
Total_efficiency |
7.85 |
Read_depth |
1.17 |
Mitochondrial_reads |
5357 |
Maximum_read_length |
30 |
NRF |
1.0 |
PBC1 |
15975.0 |
PBC2 |
15975.0 |
Unmapped_reads |
468224 |
TSS_Plus_Score |
33.3 |
TSS_Minus_Score |
4.3 |
Pause_index |
228.97 |
Plus FRiP |
0.07 |
Minus FRiP |
0.07 |
mRNA_contamination |
4.26 |
Time |
0:09:52 |
Success |
11-27-14:04:51 |